Relationships between body size and secondary sexual characters,and sperm characters in male Dolly Varden char (Salvelinus malma)

In Salmonidae, subordinate males are exposed to higher risks of sperm competition than dominant males and thus are expected to improve the sperm characteristics (sperm concentrations, sperm velocity and sperm longevity). In this study, we investigated the relationships between body size and secondary sexual characters (breeding colour, hump height and snout length), and sperm characteristics of one‐year‐old (newly matured) Dolly Varden char. Small males displayed higher sperm concentrations than large males. Moreover, males with dull breeding colours, but not with lesser snout length and hump height, displayed an increased sperm velocity compared to males with bright colours, suggesting a trade‐off between sperm quantity and the investment in breeding colour. In addition, sperm longevity decreased as sperm swimming velocity increased. These findings indicate that small males with dull breeding colours improve the quantity and quality of their sperm to a great extent to enhance their chances of reproductive success.     

Mean retention time of digesta in the different segments of the equine hindgut

Six Thoroughbred horses were used to determine the mean retention time (MRT) of digesta in the different segments of the hindgut. The horses were fed timothy hay or silage in equal amounts (1.6% bodyweight [BW]/day) every 3 h/day. Hay or silage labeled with the rare earth elements cerium, dysprosium, neodymium, ytterbium, lanthanum, samarium and praseodymium, were fed to the horses 36, 30, 24, 18, 12, 6 and 3 h before slaughter, respectively. Just after slaughter, digesta samples in the different segments were collected and determined for the contents of the rare earth elements. Using these data, a method to calculate the MRT in the different segments was proposed. There were no significant differences between diets in the MRT of each segment. The averaged MRT of hay and silage in the cecum, right ventral colon, left ventral colon, left dorsal colon, right dorsal colon and small colon was 2.9, 3.1, 5.9, 1.0, 4.0, and 4.0 h, respectively. The dry matter weight of the digesta was related to the MRT in the right ventral colon (r = 0.94, P = 0.005), left ventral colon (r = 0.87, P = 0.03), left dorsal colon (r = 0.98, P < 0.001) and right dorsal colon (r = 0.95, P = 0.004), but it was not related to the MRT in the cecum and small colon.     

T4-type bacteriophage communities estimated from the major capsid genes (g23) in manganese nodules in Japanese paddy fields

The present study compared the capsid gene ( g23 ) of T4-type bacteriophages (phages) in Mn nodules with those in the plow layer soil and subsoils of two Japanese paddy fields by applying the primers MZIA1bis and MZIA6 to DNA extracts from the nodules and soils. The deduced amino acid sequences of the g23 genes in the Mn nodules were similar to those in the plow layer soil and in the subsoils. This result indicated that similar T4-type phage communities developed at these sites and that the diversity of T4-type phage communities was wide enough to cover those in the plow layer soil and in the subsoils. The majority of g23 clones formed several clusters with the clones and phages obtained from far-apart paddy fields, and the sequences of two clones were completely identical to a phage and a clone from other paddy fields at the nucleotide or amino acid level, indicating horizontal transfer of g23 genes between those paddy fields. A clone with a long nucleotide residue (686 bp) and a distribution remote from the other clones in the phylogenetic tree indicated that there were many uncharacterized, novel g23 genes in the paddy fields.     

Potential of near infrared spectroscopy to determine the lipid content of untreated garbage compost

The purpose of the present study was to evaluate the capability of near infrared spectroscopy (NIRS) as a simple method to monitor the lipid content of garbage compost, which is a potential inhibitor of plant growth. We conducted a cultivation experiment with vegetable mock pak choy ( Brassica rapa L. Parachinensis Group) using two application rates of four garbage composts that differed in lipid content. The input of lipid from the compost to the field showed a significant negative correlation with germination rate and plant height in the initial growth stage. Reflectance spectra of untreated and freeze-dried and milled compost samples were taken using a scanning monochromator. Second-derivative spectra and multiple regression analysis were used to develop calibration equations for lipid and moisture contents. The calibration was carried out with the short wavelength region ([SWR] 800–1100 nm) and the long wavelength region ([LWR] 1100–2500 nm) separately. The calibration equations with the LWR were more accurate than those with the SWR for lipid and moisture determinations. The accuracies of the calibration equations for untreated samples were comparable to those for freeze-dried and milled samples. In conclusion, we suggest that the application rate of garbage compost can be determined by measuring the lipid content of untreated samples by NIRS.     

Identification of a peptide in enzymatic hydrolyzate of cheese that inhibits ovalbumin permeation in Caco-2 cells

Because the first step in the triggering of food allergy is the permeation of the allergen through the intestine, enhancement of the intestinal barrier function is thought to be effective for preventing food allergy. In this study, a peptide that inhibits ovalbumin (OVA) permeation in an in vitro Caco-2 cell model was isolated from enzymatic hydrolyzate of cheese (EHC). Amino acid sequence analysis identified the active peptide as GPIVLNPWDQ, a sequence identical to amino acids 102-111 of alphas2-casein. The decapeptide significantly inhibited OVA permeation at a concentration of 10(-6) M. In addition, it was found that a pentapeptide half, NPWDQ, is essential for the inhibitory activity because NPWDQ but not GPIVL had nearly the same inhibitory activity as GPIVLNPWDQ. The possibility exists that EHC and/or peptides possessing the NPWDQ sequence can be practically applied to the prevention of food allergy.     

Strategies and engineering adaptions to disseminate SRI methods in large-scale irrigation systems in Eastern Indonesia

The system of rice intensification (SRI) developed in Madagascar has been controversial in part because there have been no large-scale, long-term evaluations of the impact of its alternative methods. This paper summarizes experience with the dissemination of SRI practices across eight provinces in Eastern Indonesia over nine seasons from 2002 to 2006 under a major irrigation project. The Decentralized Irrigation System Improvement Project (DISIMP) was financed by the Japanese Government with project management by a Nippon Koei consultant team. SRI has been introduced in Indonesia via several organizations and in different parts of the country starting in 2000. The evaluation reported here, made by the DISIMP technical assistance team, is based on data from 12,133 on-farm comparison trials that covered a total area of 9,429 ha. Under SRI management, average paddy yield increase was 3.3 t/ha (78%). This was achieved with about 40% reduction in water use, 50% reduction in chemical fertilizer applications, and 20% lower costs of production. The farmers whom DISIMP was assisting to take up SRI were usually cultivating their paddy fields individually within irrigation systems where it was difficult to reduce water applications as recommended for SRI. Accordingly, innovations had to be made in soil and water management to create relatively aerobic soil conditions so that farmers could get the more productive rice phenotypes expected from SRI practice. This article describes the modifications made to adapt SRI concepts, pointing to the value of introducing in-field ditches, which was confirmed through paddy tract surveys. This experience and analysis showed how SRI methods could be utilized within irrigation systems where water management was not (yet) tailored to SRI production practices. Subsequently, modifications in irrigation system management are being made to be more supportive of SRI cultivation.     

Allelopathic potential of itchgrass (Rottboellia exaltata L. f.) powder incorporated into soil

Itchgrass ( Rottboellia exaltata L. f.) is a widespread weed in northern Thailand. The farmers in this area have been using itchgrass as a mulching material in order to control other weeds in vegetable fields. Laboratory experiments were undertaken to investigate the phytotoxic activity of itchgrass powder incorporated into soil in order to evaluate the allelopathic activity in the field. The phytotoxic activity on the growth of radish seedlings ( Raphanus sativa L. var. radicula ), used as a test plant, was more pronounced in the root than in the shoot growth. The phytotoxic activity was found to be similar for the soils incorporated with the shoot or the root powder of itchgrass. The growth of the radish seedlings grown in sea sand and watered with soil water obtained from the soil previously incorporated with itchgrass powder showed a similar inhibition to those planted in the treated soil. The phytotoxic activity on the growth of the radish seedlings in the soil incorporated with the powder decreased over time. It is suggested that itchgrass releases phytotoxic compound(s) into soil water and the concentration of the active compound(s) in the soil water decreases over time.     

Stock assessment of Japanese eels using Japanese abundance indices

The paper compiles a catch history of Japanese eels Anguilla japonica in East Asia and some Japanese relative abundance series. Maximum likelihood estimates of stock abundance of eels have been obtained using the abundance series and various biological parameters, such as growth, maturity and natural mortality. Age- and sex-structured models have been used to express the dynamics of stock abundance, and the Beverton and Holt model has been used to express the relationship between stock and recruitment. Data for estimations are standardized catch per unit effort of commercial fishery for exploitable stock (1954–2006 and 1968–2008) and for glass eel (1954–2010, 1972–2004, and 1973–1997). From the results of the base case scenario of estimations, the estimated stock size of individuals aged ≥1 year was 18.7 thousand tons in 2010, which was 24 % of the carrying capacity. The estimated stock size has recovered since 1990. Maximum sustainable yield was 4,180 tons if only the exploitable stock were utilized, and 266 tons if only the glass eel were utilized. These results and issues relating to estimation and management for reducing the fishery impact on stock are discussed.